Content-type: text/html Manpage of CLUSTALWTOFASTA

CLUSTALWTOFASTA

Section: User Commands (1)
Updated: April 3, 2002
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NAME

clustalwtofasta - a program to convert a clustalw alignment file into a FASTA format file containing the aligned sequences  

SYNOPSIS

clustalwtofasta -i <infile> -o <outfile> [options]  

DESCRIPTION

clustalwtofasta reads in a CLUSTALW alignment from a file and outputs the aligned sequences in FASTA format, in the same order that they appear in the CLUSTALW file  

OPTIONS

clustalwtofasta accepts the following options:
-i <infile>
specify the file containing the CLUSTALW alignment
-o <outfile>
specify a file name to which to write the FASTA sequences. If no outfile is provided, the sequences are written to stdout
 

AUTHOR

Kevin Thornton <kevin@krthornt.uchicago.edu>.
 

Index

NAME
SYNOPSIS
DESCRIPTION
OPTIONS
AUTHOR

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Time: 18:00:52 GMT, November 24, 2002