Sequence::PolySIM Member List

This is the complete list of members for Sequence::PolySIM, including all inherited members.
a_sub_n(void)Sequence::PolySNP [protected]
a_sub_n_plus1(void)Sequence::PolySNP [protected]
b_sub_n(void)Sequence::PolySNP [protected]
b_sub_n_plus1(void)Sequence::PolySNP [protected]
c_sub_n(void)Sequence::PolySNP [protected]
d_sub_n(void)Sequence::PolySNP [protected]
DandVH(void)Sequence::PolySNP
DandVK(void)Sequence::PolySNP
DepaulisVeuilleStatistics(void)Sequence::PolySNP [protected]
Disequilibrium(const unsigned &mincount=1, const double &max_marker_distance=std::numeric_limits< double >::max())Sequence::PolySNP
Dnominator(void)Sequence::PolySIM [virtual]
FuLiD(void)Sequence::PolySIM [virtual]
FuLiDStar(void)Sequence::PolySIM [virtual]
FuLiF(void)Sequence::PolySIM [virtual]
FuLiFStar(void)Sequence::PolySIM [virtual]
Hprime(bool likeThorntonAndolfatto=false)Sequence::PolySIM [virtual]
HudsonsC(void)Sequence::PolySNP
HudsonsHaplotypeTest(int subsize, int subss)Sequence::PolySIM
Minrec(void)Sequence::PolySIM [virtual]
NumExternalMutations(void)Sequence::PolySIM [virtual]
NumMutations(void)Sequence::PolySIM [virtual]
NumPoly(void)Sequence::PolySNP
NumSingletons(void)Sequence::PolySIM [virtual]
PolySIM(const Sequence::SimData *data)Sequence::PolySIM [explicit]
PolySNP(const Sequence::PolyTable *data, bool haveOutgroup=false, unsigned outgroup=0, bool totMuts=true)Sequence::PolySNP [explicit]
rep (defined in Sequence::PolySNP)Sequence::PolySNP [protected]
SamplingVarPi(void)Sequence::PolySNP
StochasticVarPi(void)Sequence::PolySNP
TajimasD(void)Sequence::PolySIM [virtual]
ThetaH(void)Sequence::PolySIM [virtual]
ThetaL(void)Sequence::PolySIM [virtual]
ThetaPi(void)Sequence::PolySIM [virtual]
ThetaW(void)Sequence::PolySIM [virtual]
VarPi(void)Sequence::PolySNP
VarThetaW(void)Sequence::PolySNP
WallsB(void)Sequence::PolySIM [virtual]
WallsBprime(void)Sequence::PolySIM [virtual]
WallsQ(void)Sequence::PolySIM [virtual]
WallStats(void) (defined in Sequence::PolySIM)Sequence::PolySIM [protected, virtual]
~PolySIM(void) (defined in Sequence::PolySIM)Sequence::PolySIM [virtual]
~PolySNP(void) (defined in Sequence::PolySNP)Sequence::PolySNP [virtual]
Generated on Thu Aug 11 13:22:02 2011 for libsequence by  doxygen 1.6.3