SeqUtilities.hpp File Reference

Declaration of Sequence::makeCountList (an alternative to Sequence::stateCounter), Sequence::internalGapCheck. More...

#include <iterator>
#include <algorithm>
#include <map>
#include <boost/type_traits.hpp>
#include <boost/static_assert.hpp>

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Namespaces
namespace	Sequence
	The namespace in which this library resides.
Functions
template<typename Iterator >
std::map< typename std::iterator_traits< Iterator > ::value_type, unsigned >	Sequence::makeCountList (Iterator beg, Iterator end)
template<typename Iterator >
bool	Sequence::internalGapCheck (Iterator beg, Iterator end, const char &gapchar= '-', const unsigned &mod=3)

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Detailed Description

Declaration of Sequence::makeCountList (an alternative to Sequence::stateCounter), Sequence::internalGapCheck.

This file declares various functions (mostly templates) that may be useful in programs.

Definition in file SeqUtilities.hpp.