Content-type: text/html Man page of KIMURA80

KIMURA80

Section: User Commands (1)
Updated: April 3, 2002
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NAME

kimura80 - a program to calculate Kimura's 2-parameter distance between all pairs of sequences in a file.

SYNOPSIS

kimura80 -i <infile> -I <nint> <i,j,k,l,...> -O <outgroup> [options]

DESCRIPTION

kimura80 calculates Kimura's distances for all pairwise comparisons in a FASTA file. The values '999' or 'inf' will be output if the corrected divergence is too low or too high, respectively

OPTIONS

kimura80 accepts the following options:

-i <infile>: specify a file containing aligned sequences in FASTA format to analyze

AUTHOR

Kevin Thornton <k-thornton@uchicago.edu>

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Time: 16:18:46 GMT, August 06, 2003