Course materials for EE283, Winter 2017

(Tentative) overview for first 5 weeks

• Week 1: Quick tour of Python + git/GitHub. Mention Anaconda/Bioconda.
• Week 2: “Advanced” HPC tips and tricks.
• Week 3: Rstudio and/or Jupyter notebooks: the “lab notebooks” of computational biology. Publication-quality graphics using ggplot2.
• Week 4: Makefiles and automation.
• Week 5: General issues in dealing with “big data”. Out-of-memory analysis using SQLite

Materials may be found here